Publicaciones ISI

  1. Aballai V., Aedo J.E., Maldonado, J., Bastias-Molina, M., Silva, H., Meneses, C., Boltaña, S., Reyes, A., Molina, A., Valdés J.A. 2017. RNA-seq analysis of the head-kidney transcriptome response to handling-stress in the red cusk-eel (Genypterus chilensis). Comparative Biochemistry and Physiology, 24: 111-117.
  2. Avendaño-Herrera, R., Irgang, R., Tapia-Cammas, D. 2017. PCR procedure for detecting the fish pathogen Tenacibaculum dicentrarchi. Journal of Fish Diseases, 41: 715-719
  3. Avendaño, R., Tapia, D., Aedo, A., Saldivia, P., Ortega, C., Irgang, R. 2017. Disease caused by Yersinia ruckeri serotype O2b found in Chilean-farmed coho salmon, Oncorhynchus kisutch (Walbaum, 1792). J. Fish. Dis., 40(2), 279-285.
  4. Avendaño-Herrera, R., Tobaj, J., Tobar, I., Fernández-Caro, C. 2017. Universal probe library assay for the detection of infectious pancreatic necrosis virus genogroups 1 and 5 in salmonid tissues. Aquaculture Research, 48(4), 1962-1967.
  5. Bethke, J., Avendaño-Herrera, R. 2017. Comparative genome analysis of two Streptoccocus phocae subspecies provides novel insights into pathogenicity. Marine Genomics, 31:53-61.
  6. Bethke, J., Quezada, J., Poblete-Morales, M., Irgang, R., Yáñez, A., Avendaño-Herrera, R. 2017. Biochemical, serological, and genetic characterisation of Renibacterium salmoninarum isolated from salmonids in Chile. Bulletin of the European Association of Fish Pathologists, 37: 167-177
  7. Boltaña, S., Sanhueza, N., Aguilar, A., Gallardo‐Escárate, C., Arriagada, G., Valdés, J.A., Soto, D., Quiñones, R.A. 2017.Influences of thermal environment on fish growth. Ecology and Evolution, 7(17): 6814-6825.]
  8. Calquín, P., Ruiz, P., Oliver, C., Sánchez, P., Haro, R., Oliva, H., Vargas-Chacoff, L., Avendaño-Herrera, R., Yáñez, A. J. 2017. Physiological evidence that Piscirickettsia salmonis produces siderophores and uses iron from different sources. Journal of Fish Diseases, 41:553-558.
  9. Cárcamo J.G., Aguilar, M.N., Carreño, C.F., Vera, T., Arias-Darraz, L., Figueroa, J.E., Romero, A.P., Álvarez, M., Yáñez, A.J. 2017. Consecutive emamectin benzoate and deltamethrin treatments affect the expressions and activities of detoxification enzymes in the rainbow trout (Oncorhynchus mykiss). Comparative Biochemistry and Physiology – Part C: Toxicology & Pharmacology, 191: 129-137.
  10. Cárcamo, P.J., Hernández-Miranda, E., Veas, R., Quiñones, R.A. 2017. Macrofaunal community structure in Bahía Concepción (Chile) before and after the 8.8 Mw Maule mega-earthquake and tsunami. Marine Environmental Research, 130: 233-247.
  11. Cartes, C., Isla, A., Lagos, F., Castro, D., Muñoz, M., Yáñez, A., Haussmann, D., Figueroa, J. 2017. Search and analysis of genes involved in antibiotics resistance in chilean strains of Piscirickettsia salmonis. J. of Fish Diseases, 40(8):1025-1039.
  12. Castillo, Y., Ortega, C., Fajardo, R., Martínez, S., Valladares, B., Irgang, R., Poblete, M., Avendaño, R. 2017. First isolation and characterization of Flavobacterium psychrophilum from diseased rainbow trout (Oncorhynchus mykiss) farmed in Mexico. Bull. Eur. Fish. Pathol, 37(1), 19-26.
  13. Castro, D., Carrera, C., Gallardo, C., Gonçalves, A. 2017. Functional diets modulate the acute phase protein response in Oncorhynchus mykiss subjected to chronic stress and challenged with Vibrio anguillarum. Fish and Shellfish Immunology, 66, 62-70.
  14. Cortés, M., Sánchez, P., Ruiz, P. Haro, R., Sáez, J., Sánchez, F., Hernández, M., Oliver, C., Yáñez, A.J. 2017. In vitro expression of Sec-dependent pathway and type 4B secretion system in Piscirickettsia salmonis. Microbial Pathogenesis, 110: 586-593
  15. Détrée, C., Gallardo, C. 2017. Polyethylene induces transcription responses with tissue-dependent patterns in the mussel Mytilus galloprovincialis. Journal of Molluscan Studies, 83(2): 220–225.
  16. Détrée, C., López, E., Gallardo, C., Lafarga, F. 2017. Transcriptome mining of immune-related genes in the muricid snail Concholepas concholepas. Fish and Shellfish Immunology, 71: 69-75.
  17. Espinoza, M., Aedo, J., Zuloaga, R., Valenzuela, C., Molina, A., Valdés, J. 2017. Cortisol Induces Reactive Oxygen Species Through a Membrane Glucocorticoid Receptor in Rainbow Trout Myotubes. Journal of Cellular Biochemistry, 118(4), 718-725.
  18. Farlora, R., Valdevenito-Aguayo, F., Valenzuela-Muñoz, V., Gallardo-Escárate, C.2017. Hydrogen peroxide treatment modulates the transcription of sex-related genes in the sea louse Caligus rogercresseyi. Journal of Fish Diseases, 41(6):921-926.
  19. Fuentes, E.N., Zuloaga, R., Almarza, O., Mendez, K., Valdés, J.A., Molina, A., Pulgar, J. 2017. Upwelling-derived oceanographic conditions impact growth performance and growth-related gene expression in intertidal fish. Comparative Biochemistry and Physiology – Part B: Biochemistry & Molecular Biology, 214: 12-18.
  20. González-Stegmaier, R., Villarroel-Espindola, F., Manríquez, R., López, M., Monrás, M., Figueroa, J., Enríquez, R., Romero, A. 2017. New inmunomodulatory role of neuropeptide Y (NPY) in the leucocytes of Salmo salar. Developmental and Comparative Immunology, 76: 303-309.
  21. Gutiérrez, M.H., Garces, D.V. Pantoja, González, R.R. Quiñones, R.A. 2017. Environmental fungal diversity in the upwelling ecosystem off central Chile and potential contribution to enzymatic hydrolysis of macromolecules in coastal ecotones. Fungal Ecology, 29: 90-95.
  22. Gallardo, C., Valenzuela, V., Boltaña, S., Núñez, G., Valenzuela, D., Gonçalves, A., Détrée, C., Tarifeño, E., Farlora, R., Roberts, S., Putnam, H. 2017. The Caligus rogercresseyi miRNome: discovery and transcriptome profiling during the sea lice ontogeny. Agri Gene, 4: 8-22.
  23. Gonçalves, A., Gallardo, C. 2017. Microbiome dynamic modulation through functional diets based on pre- and probiotics (mannan-oligosaccharides and Saccharomyces cerevisiae) in juvenile rainbow trout (Oncorhynchus mykiss). Journal of Applied Microbiology, 122(5): 1333-1347.
  24. Gonçalves, A., Valenzuela, V., Gallardo, C. 2017. Intestinal transcriptome modulation by functional diets in rainbow trout: a high-throughput sequencing appraisal to highlight GALT immunomodulation. Fish and Shellfish Immunology, 64,325-338.
  25. Hasan, M.R., Soto, S. 2017. Improving feed conversion ratio and its impact on reducing greenhouse gas emissions in aquaculture. FAO Non-Serial Publication. Rome, FAO. 33 pp.
  26. Kampfer, P., Irgang, R., Poblete, M., Glaeser, S., Cortez, M., Avendaño, R. 2017. Psychromonas aquatilis sp. nov. isolated from water samples obtained in the Chilean Antarctica. Int J Syst Evol Microbiol.
  27. Lagos, F., Cartes, C., Haussmann, D., Figueroa, J. 2017. Identification of genomic islands in Chilean Piscirickettsia salmonis strains and analysis of gene expression involved in virulence.J. of Fish Diseases,
  28. Le Gouvello, R., Hochart, L-E., Laffoley, D., Simard, F., Andrade, C., Angel, D., Callier, M., De Monbrison, D., Fezzardi, D., Haroun, R., Harris, A., Hughes, A., Massa, F., Roque, E., Soto, D., Stead, S., Marino, G. 2017. Aquaculture and marine protected areas: Potential opportunities and synergies. Aquatic Conservation: Marine and Freshwater Ecosystems, 27(1), 138–150.
  29. Levican, A., Lasa, A., Irgang, R., Romalde, J., Poblete, M., Avendaño, R. 2017. Isolation of Vibrio tapetis from two native fish species (Genypterus chilensis and Paralichthys adspersus) reared in Chile and description of Vibrio tapetis subsp. quintayensis subsp. Int J Syst Evol Microbiol, 67(3), 716-723.
  30. Levipan, H., Avendaño, R. 2017. Different phenotypes of mature biofilm in Flavobacterium psychrophilum share a potential for virulence that differs from planktonic state. Front. Cell. Infect. Microbiol., 15, 7-76.
  31. López, E., Portillo, A., Gallardo, C., Del Rio Portilla, M. 2017. Sex-related genes expression in juveniles of red abalone, Haliotis rufescens (Swanson, 1822). Invertebrate Reproduction & development, 61, 58-69.
  32. Manríquez, R., Vera, T., Villalba, M., Mancilla, A., Vakharia, V., Yáñez, A., Cárcamo, J. 2017. Molecular characterization of infectious pancreatic necrosis virus strains isolated from the three types of salmonids farmed in Chile. Virology Journal, 14(1):17.
  33. Martínez, D., Oyarzún, R., Vargas, C., Pontigo, J., Soto, J., Saravia, A., Romero, J., Núñez, A., Yáñez, J., Vargas, L. 2017. Identification, characterization and modulation of ferritin-H in the sub-Antarctic Notothenioid Eleginops maclovinus challenged with Piscirickettsia salmonis. Developmental and Comparative Immunology, 73, 88-96.
  34. Naour, S., Espinoza, B., Aedo, J., Zuloaga, R., Maldonado, J., Bastias, M., Silva, H., Meneses, C., Gallardo, C., Molina, A., Valdés, J. 2017. Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis. PLoS One,12(4): e017644.
  35. Nardocci, G., Simonet, N., Navarro, C., Langst, G., Álvarez, M. 2017. Differential enrichment of TTF-I and Tip5 in the T-like promoter structures of the rDNA contribute to the epigenetic response of Cyprinus carpio during environmental adaptation. Biochem Cell Biol, 94 (4), 315-321.
  36. Nardocci, G., Simonet, N., Navarro, C., Langst, G., Álvarez, M. 2017. Differential enrichment of TTF-I and Tip5 in the T-like promoter structures of the rDNA contribute to the epigenetic response of Cyprinus carpio during environmental adaptation. Biochem Cell Biol, 94, 315-321.
  37. Núñez, G., Détrée, C., Gallardo, C., Gonçalves, A. 2017. Functional diets modulate lncRNA-coding RNAs and gene interactions in the intestine of rainbow trout Oncorhynchus mykiss. Marine Biotechnology, 19(3):287-300.
  38. Peña, J., Dresdner, J., Vásquez, F. 2017. El Niño and Fishing Location Decisions: The Chilean Straddling Jack Mackerel Fishery. Marine Resource Economics, 32(3): 249-275.
  39. Segovia, N., Gallardo, C., Poulin, E., Haye, P. 2017. Lineage divergence, local adaptation across a biogeographic break, and artificial transport, shape the genetic structure in the ascidian Pyura chilensis. Scientific reports, 7: 44559.
  40. Tarifeño, E., Valenzuela, D., Gallardo, C. 2017. In the shadow: the emerging role of long non-coding RNAs in the immune response of Atlantic salmon. Developmental and Comparative Immunology, 73:193-205.
  41. Valenzuela, C., Zuloaga, R., Poblete, M., Vera, T., Mercado, L., Avendaño, R., Valdés, J., Molina, A. 2017. Fish skeletal muscle tissue is an important focus of immune reactions during pathogen infection. Comp. Immunology, 73, 1-9.
  42. Valenzuela, D., Asgari, S., Gallardo, C. 2017. Long noncoding RNAs: unexplored players in the drug response of the sea louse Caligus rogercresseyi. Agri Gene, 4, 1-7.
  43. Iturriaga, M., Espinoza, M.B., Poblete-Morales, M., Feijoo, C.G., Reyes, A.E., Molina, A., Avendaño-Herrera, R., Valdés, J.A. 2017. Cytotoxic activity of Flavobacterium psychrophilum in skeletal muscle cells of rainbow trout (Oncorhynchus mykiss). Veterinary Microbiology, 210: 101-106.
  44. Krautz, M.C., Hernández‑Miranda, E., Veas, R., Bocaz, P., Riquelme, P., Quiñones, R.A. 2017. An estimate of the percentage of non-predatory dead variability in coastal zooplankton of the southern Humboldt Current System. Marine Environmental Research, 132: 103-116 h
  45. Martínez, D., Oyarzún, R., Pontigo, J. P., Romero, A., Yáñez, A.J., Vargas-Chacoff, L. Nutritional Immunity Triggers the Modulation of Iron Metabolism Genes in the Sub-Antarctic Notothenioid Eleginops maclovinus in Response to Piscirickettsia salmonis. Frontiers in Immunology, 8: 1153-2017.
  46. Montes, R.M., Quiñones, R.A. 2017. Long-range dependence in the runoff time series of the most important Patagonian river draining to the Pacific Ocean. New Zealand Journal of Marine and Freshwater Research, 52: 264-283.
  47. Nourdin-Galindo1, G., Sánchez, P., Molina, C., Espinoza-Rojas, D., Oliver, C., Ruiz, P., Vargas-Chacoff, L., Cárcamo, J.G.; Figueroa, J., Mancilla, M., Maracaja-Coutinho, V., Yáñez, A.J.2017. Comparative Pan-Genome Analysis of Piscirickettsia salmonis Reveals Genomic Divergences within Genogroups. Frontiers in Cellular and Infection Microbiology, 7:1-16.
  48. Oliver, C., Hernández, M.A., Tandberg, J.I., Valenzuela, K.N., Lagos, L.X., Haro, R.E., Sanchez, P., Ruiz, P., Sanhueza-Oyarzún, C., Cortés, M.A., Villar, M., Artigues, A., Winther-Larsen, H., Avendaño-Herrera, R, Yáñez, A.2. 2017. The proteome of biologically active membrane vesicles from Piscirickettsia salmonis LF-89 type strain identifies plasmid-encoded putative toxins. Frontiers in Cellular and Infection Microbiol., 7:420.
  49. Tandberg, J., Oliver, C., Lagos, L., Gaarder, M., Yáñez, A. J., Ropstad, E., Winther-Larsen, H. C. 2017. Membrane vesicles from Piscirickettsia salmonis induce protective immunity and reduce development of salmonid rickettsial septicemia in an adult zebrafish model. Fish and Shellfish Immunology, 67: 189-198.
  50. Valdés, V., Fernández, C., Molina, V., Escribano, R., Joux, F. 2017. Dissolved Compounds Excreted by Copepods Reshape the Active Marine Bacterioplankton Community Composition. Frontiers in Marine Science, 4: 343.
  51. Valenzuela-Miranda, D., Valenzuela-Muñoz, V., Farlora, R., Gallardo-Escárate, C. 2017.MicroRNA-based transcriptomic responses of Atlantic salmon during infection by the intracellular bacterium Piscirickettsia salmonis. Developmental and comparative immunology, 77: 287-296.
  52. Valenzuela-Muñoz, V., Boltaña, S., Gallardo-Escárate, C. 2017. Uncovering iron regulation with species-specific transcriptome patterns in Atlantic and coho salmon during a Caligus rogercresseyi Journal of Fish Diseases, 40: 1169-1148.
  53. Valenzuela-Muñoz, V., Novoa, B., Figueras. Gallardo-Escárate, C. 2017. Modulation of Atlantic salmon miRNome response to sea louse infestation. Developmental and comparative immunology, 76: 380-391.
  54. Vergara, O.A., Echevín, V., Sepúlveda, H.H., Quiñones, R.A.  2017. Controlling factors of the seasonal variability of productivity in the southern Humboldt Current System (30–40°S): A biophysical modeling approach. Continental Shelf Research. 148: 89-103.

Publicaciones No ISI

  1. Aguilar, J., Soto, D., Brummett, R. 2017. Aquaculture zoning, site selection and area management under the ecosystem approach to aquaculture. A handbook. pp.62. Rome: FAO, and World Bank Group, Washington, DC.
  2. Bueno, P., Soto, D. 2017. FAO. 2017. Adaptation Strategies of the Aquaculture Sector to the Impacts of Climate Change. FAO Fisheries and Aquaculture Circular, Rome Italy, 1142, 28.
  3. David, H.F., MacLeod, M., Hasan, M., Soto, D. 2017. Greenhouse gas emissions from aquaculture. A life cycle assessment of three Asian systems. FAO Fisheries and Aquaculture Technical Paper, 1-110.
  4. Elbehri, A., Challinor, A., Verchot, L., Angelsen, A., Hess, T., Ouled, A., Clark, H., Badraoui, M., Cowie, A., De Silva, S., Erickson, J. Joar, S., Iglesias, A., Inouye, D., Jarvis, A., Mansur, E., Mirzabaev, A., Montanarella, L., Murdiyarso, D., Notenbaert, A., Obersteiner, M., Paustian, K., Pennock, D., Reisinger, A., Soto, D., Soussana, J., Thomas, R., Vargas, R., Van Wijk, M., Walker, R. 2017. FAO-IPCC Expert Meeting on Climate Change, Land Use and Food Security: Final Meeting Report. January 23-25, 2017 FAO HQ Rome. FAO and IPCC, Meeting report.
  5. Harvey, B., Soto, D., Carolsfeld, J., Beveridge, M., Bartley, D. 2017. Planning for aquaculture diversification: The importance of climate change and other drivers. Food and Agriculture Organization of the United Nations, 47, 1-166.
  6. Hasan, M.R., Soto, S. 2017. Improving feed conversion ratio and its impact on reducing greenhouse gas emissions in aquaculture. FAO Non-Serial Publication. Rome, FAO. 33 pp.
  7. Lagos, F., Cartes, C., Vera, T., Haussmann, D., Figueroa J. 2017. Identificacion de islas genomicas en cepas chilenas de Piscirickettsia salmonis. Salmonexpert, 47, 40-45.
  8. Leggieri, L., De Anna, J., Cerón, G., Arias, L., Fuentes, D., Cárcamo, J., Luquet, C. 2017. CYPs Molecular Biomarkers in Rainbow trout Oncorhynchus mykiss to Assess Oil Contamination in a Patagonian Stream. RICA, 33(4): 681-690.
  9. Toranzo, A.E., Magariños, B., Avendaño, R. 2017. Vibriosis: Vibrio anguillarum, V. ordalii and Aliivibrio salmonicida. Fish Viruses and Bacteria: Pathobiology and Protection. pp. 314-333. Cabi: Woo P and Cipriano RC.