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PUBLICACIONES/PUBLICATIONS 2017

  1. Le Gouvello, R., Hochart, L-E., Laffoley, D., Simard, F., Andrade, C., Angel, D., Callier, M., De Monbrison, D., Fezzardi, D., Haroun,  R., Harris, A., Hughes, A., Massa, F., Roque, E., Soto, D., Stead, S & Marino, G. (2017).  Aquaculture and marine protected areas: Potential opportunities and synergies. Aquatic Conservation: Marine and Freshwater Ecosystems, 27(1), 138–150.
  2. Hasan, M.R. & Soto, S. 2017. Improving feed conversion ratio and its impact on reducing greenhouse gas emissions in aquaculture. FAO Non-Serial Publication. Rome, FAO. 33 pp.
  3. H.F, David., MacLeod, M., Hasan, M & Soto, D. (2017). Greenhouse gas emissions from aquaculture. A life cycle assessment of three Asian systems. FAO FISHERIES AND AQUACULTURE TECHNICAL PAPER, 1-110.
  4. Harvey, B., Soto, D., Carolsfeld, J., Beveridge, M & Bartley, D. (2017). Planning for aquaculture diversification: The importance of climate change and other drivers. Food and Agriculture Organization of the United Nations, 47, 1-166.
  5. Segovia, N., Gallardo, C., Poulin, E & Haye, P. (2017). Lineage divergence, local adaptation across a biogeographic break, and artificial transport, shape the genetic structure in the ascidian Pyura chilensis. Scientific reports. doi:10.1038/srep44559
  6. Gonçalves, A., Valenzuela, V & Gallardo, C. (2017). Intestinal transcriptome modulation by functional diets in rainbow trout: a high-throughput sequencing appraisal to highlight GALT immunomodulation. Fish and Shellfish Immunology, 64,325-338.
  7. Gonçalves, A & Gallardo, C. (2017). Microbiome dynamic modulation through functional diets based on pre- and probiotics (mannan-oligosaccharides and Saccharomyces cerevisiae) in juvenile rainbow trout (Oncorhynchus mykiss). Journal of Applied Microbiology, 122(5), 1333-1347.
  8. Valenzuela, D., Asgari, S & Gallardo, C. (2017). Long noncoding RNAs: unexplored players in the drug response of the sea louse Caligus rogercresseyi. AgriGene, 4, 1-7.
  9. Núñez, G., Détrée, C., Gallardo, C & Gonçalves, A. (2017). Functional diets modulate lncRNA-coding RNAs and gene interactions in the intestine of rainbow trout Oncorhynchus mykiss. Marine Biotechnology,1-14.
  10. Détrée, C., & Gallardo, C.(2017). Polyethylene induces transcription responses with tissue-dependent patterns in the mussel Mytilus galloprovincialis. Journal of Molluscan Studies, 1-6.
  11. Tarifeño, E., Valenzuela, D & Gallardo, C. (2017). In the shadow: the emerging role of long non-coding RNAs in the immune response of Atlantic salmon. Developmental and Comparative Immunology. http://dx.doi.org/10.1016/j.dci.2017.03.024
  12. Gallardo, C., Valenzuela, V., Boltaña, S., Nuñez, G., Valenzuela, D., Gonçalves, A., Détrée, C., Tarifeño, E., Farlora, R., Roberts, S & Putnam, H. (2017). The Caligus rogercresseyi miRNome: discovery and transcriptome profiling during the sea lice ontogeny. AgriGene, 4, 8-22.
  13. López, E., Portillo, A., Gallardo, C & Del Rio Portilla, M. (2017). Sex-related genes expression in juveniles of red abalone, Haliotis rufescens (Swanson, 1822). Invertebrate Reproduction & development, 61, 58-69.
  14. Naour, S., Espinoza, B., Aedo, J., Zuloaga, R., Maldonado, J., Bastias, M., Silva, H., Meneses, C., Gallardo, C., Molina, A & Valdés, J. (2017). Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis. PLoS One,12(4).
  15. Castro, D., Carrera, C., Gallardo, C & Gonçalves, A. (2017). Functional diets modulate the acute phase protein response in Oncorhynchus mykiss subjected to chronic stress and challenged with Vibrio anguillarum. Fish and Shellfish Immunology, 66, 62-70.
  16. Détrée,C., López, E., Gallardo, C & Lafarga, F. (2017). Transcriptome mining of immune-related genes in the muricid snail Concholepas concholepas. Fish and Shellfish Immunology. http://dx.doi.org/10.1016/j.fsi.2017.06.024
  17. Valenzuela, C., Zuloaga, R., Poblete, M., Vera, T., Mercado, L., Avendaño, R., Valdés, J &  Molina, A. (2017). Fish skeletal muscle tissue is an important focus of immune reactions during pathogen infection. Dev Comp Immunology, 73, 1-9.
  18. Espinoza, M., Aedo, J.,Zuloaga, R., Valenzuela, C., Molina, A & Valdés, J. (2017). Cortisol Induces Reactive Oxygen Species Through a Membrane Glucocorticoid Receptor in Rainbow Trout Myotubes. Journal of Cellular Biochemistry, 118, 718-725.
  19. Valenzuela, C., Zuloaga, R., Poblete-Morales, M., Vera-Tobar, T., Mercado, L., Avendaño-Herrera, R., Valdés, J & Molina, A. (2017). Fish skeletal muscle tissue is an important focus of immune reactions during pathogen infection. Dev Comp Immunology, 73, 1-9.
  20. Espinoza, M,. Aedo, J., Zuloaga, R., Valenzuela, C., Molina, A & Valdés, J. (2017). Cortisol Induces Reactive Oxygen Species Through a Membrane Glucocorticoid Receptor in Rainbow Trout Myotubes. Journal of Cellular Biochemistry, 118, 718-725.
  21. Levipan, H & Avendaño, R. (2017). Different phenotypes of mature biofilm in Flavobacterium psychrophilum share a potential for virulence that differs from planktonic state. Front Cell Infect Microbiol, 15, 7-76.
  22. Kampfer, P., Irgang, R., Poblete, M., Glaeser, S., Cortez, M & Avendaño, R. (2017). Psychromonas aquatilis sp. nov. isolated from water samples obtained in the Chilean Antarctica. Int J Syst Evol Microbiol. doi: 10.1099/ijsem.0.001801.
  23. Levican, A., Lasa, A., Irgang, R., Romalde, J., Poblete, M & Avendaño, R. (2017). Isolation of Vibrio tapetis from two native fish species (Genypterus chilensis and Paralichthys adspersus) reared in Chile and description of Vibrio tapetis subsp. quintayensis subsp. Int J Syst Evol Microbiol, 67(3), 716-723.
  24. Avendaño, R., Tapia, D., Aedo, A., Saldivia, P., Ortega, C & Irgang, R. (2017). Disease caused by Yersinia ruckeri serotype O2b found in Chilean-farmed coho salmon, Oncorhynchus kisutch (Walbaum, 1792). J Fish Dis, 40(2), 279-285.
  25. Avendaño-Herrera, R., Tobaj, J., Tobar, I & Fernández-Caro, C. (2017). Universal probe library assay for the detection of infectious pancreatic necrosis virus genogroups 1 and 5 in salmonid tissues. Aquaculture Research, 48(4), 1962-1967.
  26. Castillo, Y., Ortega, C., Fajardo, R., Martínez, S., Valladares, B., Irgang, R., Poblete, M & Avendaño, R. (2017). First isolation and characterization of Flavobacterium psychrophilum from diseased rainbow trout (Oncorhynchus mykiss) farmed in Mexico. Bull. Eur. Fish. Pathol, 37(1), 19-26.
  27. Nardocci, G., Simonet, N., Navarro, C., Langst, G & Alvarez, M. (2017). Differential enrichment of TTF-I and Tip5 in the T-like promoter structures of the rDNA contribute to the epigenetic response of Cyprinus carpio during environmental adaptation. Biochem Cell Biol, 94 (4), 315-321.
  28. Martínez, D., Oyarzún, R., Vargas, C., Pontigo, J., Soto, J., Saravia, A., Romero, J., Núñez, A., Yáñez, J & Vargas, L. (2017). Identification, characterization and modulation of ferritin-H in the sub-Antarctic Notothenioid Eleginops maclovinus challenged with Piscirickettsia salmonis. Developmental and Comparative Immunology, 73, 88-96.
  29. Manríquez, R.,  Vera, T., Villalba, M., Mancilla, A., Vakharia, V., Yañez, A & Cárcamo, J. (2017). Molecular characterization of infectious pancreatic necrosis virus strains isolated from the three types of salmonids farmed in Chile. Virology Journal, 14.
  30. Lagos, F., Cartes, C., Haussmann, D & Figueroa, J. (2017). Identification of genomic islands in Chilean Piscirickettsia salmonis strains and analysis of gene expression involved in virulence.J. of Fish Diseases. doi: 10.1111/jfd.12604
  31. Cartes, C., Isla, A., Lagos, F., Castro, D., Muñoz, M., Yañez, A., Haussmann, D & Figueroa, J. (2017). Search and analysis of genes involved in antibiotics resistance in chilean strains of Piscirickettsia salmonis. J. of Fish Diseases. doi: 10.1111/jfd.12579
  32. Nardocci, G., Simonet, N., Navarro, C., Langst, G & Alvarez, M. (2017). Differential enrichment of TTF-I and Tip5 in the T-like promoter structures of the rDNA contribute to the epigenetic response of Cyprinus carpio during environmental adaptation. Biochem Cell Biol, 94, 315-321.
  33. Peña, J., Dresdner, J & Vásquez, F. (2017). El Niño and Fishing Location Decisions: The Chilean Straddling Jack Mackerel Fishery. Marine Resource Economics. http://dx.doi.org/10.1086/692073.

Non ISI Publications

  1. Leggieri, L., De Anna, J., Cerón, G., Arias, L., Fuentes, D., Cárcamo, J., & Luquet, C. (2017). CYPs Molecular Biomarkers in Rainbow trout Oncorhynchus mykiss to Assess Oil Contamination in a Patagonian Stream. RICA, 33(4).
  2. Lagos, F., Cartes, C., Vera, T., Haussmann, D., & Figueroa J.(2017). Identificacion de islas genomicas en cepas chilenas de Piscirickettsia salmonis. Salmonexpert, 47, 40-45.
  3. Bueno, P., & Soto, D. (2017). FAO. 2017. Adaptation Strategies of the Aquaculture Sector to the Impacts of Climate Change. FAO Fisheries and Aquaculture Circular, Rome Italy, 1142, 28.
  4. Elbehri, A., Challinor, A., Verchot, L., Angelsen, A., Hess, T., Ouled, A., Clark, H., Badraoui, M., Cowie, A., De Silva, S., Erickson, J. Joar, S., Iglesias, A., Inouye, D., Jarvis, A., Mansur, E., Mirzabaev, A., Montanarella, L., Murdiyarso, D., Notenbaert, A., Obersteiner, M., Paustian, K., Pennock, D., Reisinger, A., Soto, D., Soussana, J., Thomas, R., Vargas, R., Van Wijk, M. & Walker, R. (2017). FAO-IPCC Expert Meeting on Climate Change, Land Use and Food Security: Final Meeting Report. January 23-25, 2017 FAO HQ Rome.  FAO and IPCC, Meeting report.

Books

  1. Hasan, M.R. & Soto, S. 2017. Improving feed conversion ratio and its impact on reducing greenhouse gas emissions in aquaculture. FAO Non-Serial Publication. Rome, FAO. 33 pp.
  2. H.F, David., MacLeod, M., Hasan, M., & Soto, D. (2017). Greenhouse gas emissions from aquaculture. A life cycle assessment of three Asian systems. FAO FISHERIES AND AQUACULTURE TECHNICAL PAPER, 1-110.
  3. Harvey, B., Soto, D., Carolsfeld, J., Beveridge, M., & Bartley, D. (2017). Planning for aquaculture diversification: The importance of climate change and other drivers. Food and Agriculture Organization of the United Nations, 47, 1-166.
  4. Alicia, E., Toranzo, B., & Avendaño, R. (2017). Vibriosis: Vibrio anguillarum, V. ordalii and Aliivibrio salmonicida.Fish Viruses and Bacteria: Pathobiology and Protection. (pp. 314-333). Cabi: Woo P and Cipriano RC. 
  5. Aguilar, J., Soto, D., & Brummett, R. (2017). Aquaculture zoning, site selection and area management under the ecosystem approach to aquaculture. A handbook.(pp.62). Rome: FAO, and World Bank Group, Washington, DC.